PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26633
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 194aa    MW: 21457.9 Da    PI: 6.5066
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26633genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.42.5e-171952234
              --SS-EEEEEEE--TT-SS-EEEEEE-ST.T--- CS
      WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpv 34
              dD+++WrKYGqK++kgs++pr+YY+C+s   C+v
  EMT26633 19 DDQWAWRKYGQKPIKGSPYPRGYYKCSSMkACTV 52
              8*************************99878987 PP

2WRKY84.41.1e-2656114259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               dD+++WrKYGqK++kgs++pr+YY+C+s   C+++k vers   p v+++tY  +H h 
  EMT26633  56 DDQWAWRKYGQKPIKGSPYPRGYYKCSSMkACTARKLVERSPAKPGVLVVTYIADHCHA 114
               8*************************99889*************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.2921352IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.2E-161552IPR003657WRKY domain
SuperFamilySSF1182901.18E-131752IPR003657WRKY domain
SMARTSM007743.0E-71854IPR003657WRKY domain
PfamPF031061.1E-121952IPR003657WRKY domain
PROSITE profilePS5081127.70350116IPR003657WRKY domain
SuperFamilySSF1182902.09E-2351116IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-2653116IPR003657WRKY domain
SMARTSM007741.4E-3055115IPR003657WRKY domain
PfamPF031065.0E-2256113IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MKKVVREVPV AEGGVNGPDD QWAWRKYGQK PIKGSPYPRG YYKCSSMKAC TVNGPDDQWA  60
WRKYGQKPIK GSPYPRGYYK CSSMKACTAR KLVERSPAKP GVLVVTYIAD HCHAVPTNIS  120
ALAGTTRHPP QSPASDDTAL NRGDDSADVS WSAAGADDES ELWSPVDMDD FFASFDDDFD  180
HFFEDDAIGR RVSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-15561161877Probable WRKY transcription factor 4
2lex_A4e-15561161877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1114163e-51AK111416.1 Oryza sativa Japonica Group cDNA clone:002-182-G03, full insert sequence.
GenBankAY6769243e-51AY676924.1 Oryza sativa (indica cultivar-group) transcription factor WRKY03 (WRKY03) mRNA, complete cds.
GenBankAY8706013e-51AY870601.1 Oryza sativa (japonica cultivar-group) WRKY12 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565854.13e-55PREDICTED: WRKY transcription factor 22-like
TrEMBLM8BXV21e-143M8BXV2_AEGTA; Uncharacterized protein
STRINGBRADI2G15405.11e-54(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP42793070
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-30WRKY family protein